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Description : component *(eIF3a) of eIF3 mRNA-to-PIC binding complex
Gene families : OG_42_0003496 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003496_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.C02676.1 | |
| Cluster | HCAA Clusters: Cluster_114 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.B02685.1 | No alias | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex | 0.06 | Orthogroups_2024-Update | |
| Kfl00078_0290 | kfl00078_0290_v1.1 | (at4g11420 : 796.0) Encodes a subunit of eukaryotic... | 0.02 | Orthogroups_2024-Update | |
| MA_5693g0010 | No alias | (at4g11420 : 943.0) Encodes a subunit of eukaryotic... | 0.03 | Orthogroups_2024-Update | |
| MA_88184g0010 | No alias | (q9xhr2|if3a_maize : 551.0) Eukaryotic translation... | 0.03 | Orthogroups_2024-Update | |
| Pp1s6_208V6 | No alias | F25E4.40; eukaryotic translation initiation factor 3... | 0.04 | Orthogroups_2024-Update | |
| Seita.5G082200.1 | No alias | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G036400.1 | No alias | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex | 0.06 | Orthogroups_2024-Update | |
| Solyc09g010460 | No alias | Eukaryotic translation initiation factor 3 subunit A... | 0.1 | Orthogroups_2024-Update | |
| Sopen09g005200 | No alias | PCI domain | 0.08 | Orthogroups_2024-Update | |
| evm.model.contig_4450.13 | No alias | (at4g11420 : 376.0) Encodes a subunit of eukaryotic... | 0.04 | Orthogroups_2024-Update | |
| evm.model.tig00000194.37 | No alias | (at4g11420 : 629.0) Encodes a subunit of eukaryotic... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Predicted GO |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| CC | GO:0005575 | cellular_component | IEP | Predicted GO |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
| MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000717 | PCI_dom | 373 | 509 |
| No external refs found! |