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  5. Brara.C02721.1

Brara.C02721.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02721.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
41460 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Orthogroups_2024-Update
A4A49_09861 No alias csc1-like protein rxw8 0.03 Orthogroups_2024-Update
At1g69450 No alias Early-responsive to dehydration stress protein (ERD4)... 0.03 Orthogroups_2024-Update
At3g54510 No alias Hyperosmolality-gated Ca2+ permeable channel 2.5... 0.03 Orthogroups_2024-Update
Bradi2g26180 No alias ERD (early-responsive to dehydration stress) family protein 0.04 Orthogroups_2024-Update
Bradi2g39230 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
Brara.A01995.1 No alias calcium-permeable channel *(OSCA) 0.05 Orthogroups_2024-Update
Brara.A02367.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
Brara.H01892.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
Brara.I01462.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
GRMZM2G164470 No alias lipases;hydrolases, acting on ester bonds 0.02 Orthogroups_2024-Update
Glyma.20G066800 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G004230.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
HORVU1Hr1G007290.18 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
HORVU1Hr1G051200.12 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
HORVU2Hr1G060390.2 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Kfl00029_0020 kfl00029_0020_v1.1 (at1g32090 : 441.0) early-responsive to dehydration... 0.02 Orthogroups_2024-Update
LOC_Os07g05570 No alias ERD4 protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g42820 No alias early-responsive to dehydration protein-related,... 0.02 Orthogroups_2024-Update
LOC_Os12g39320 No alias DUF221 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g43720 No alias early-responsive to dehydration protein-related,... 0.03 Orthogroups_2024-Update
MA_99251g0010 No alias (at1g30360 : 376.0) early-responsive to dehydration 4... 0.02 Orthogroups_2024-Update
PSME_00002534-RA No alias (at1g30360 : 781.0) early-responsive to dehydration 4... 0.03 Orthogroups_2024-Update
Potri.014G156100 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Pp1s127_53V6 No alias early-responsive to dehydration erd 0.03 Orthogroups_2024-Update
Pp1s213_49V6 No alias early responsive to dehydration protein 0.05 Orthogroups_2024-Update
Seita.3G120200.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
Seita.5G189900.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Sobic.001G140000.1 No alias calcium-permeable channel *(OSCA) 0.01 Orthogroups_2024-Update
Sobic.008G187100.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Solyc02g081030 No alias ERD (early-responsive to dehydration stress) family... 0.03 Orthogroups_2024-Update
Solyc12g088230 No alias mitochondrial malate dehydrogenase 0.03 Orthogroups_2024-Update
Sopen02g025700 No alias Domain of unknown function DUF221 0.04 Orthogroups_2024-Update
Sopen08g008540 No alias Domain of unknown function DUF221 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 196 359
IPR003864 RSN1_7TM 370 642
IPR032880 Csc1_N 7 175
No external refs found!