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  5. Brara.C02867.1

Brara.C02867.1


Description : histone demethylase *(KDM3)


Gene families : OG_42_0000491 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02867.1
Cluster HCAA Clusters: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G107051 No alias transcription factor jumonji (jmjC) domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.13G247400 No alias Zinc finger, RING-type;Transcription factor... 0.04 Orthogroups_2024-Update
Glyma.20G104900 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.U045502 No alias transcription factor jumonji (jmjC) domain-containing protein 0.03 Orthogroups_2024-Update
PSME_00029802-RA No alias (at4g00990 : 265.0) Transcription factor jumonji (jmjC)... 0.03 Orthogroups_2024-Update
Pp1s26_133V6 No alias jmjc domain containing expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003347 JmjC_dom 315 410
No external refs found!