Description : substrate adaptor of SCF E3 ubiquitin ligase complex
Gene families : OG_42_0001898 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001898_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.C02892.1 | |
Cluster | HCAA Clusters: Cluster_235 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g76670 | No alias | F-box family protein | 0.03 | Orthogroups_2024-Update | |
Bradi1g77410 | No alias | F-box family protein | 0.03 | Orthogroups_2024-Update | |
Brara.I00045.1 | No alias | substrate adaptor of SCF E3 ubiquitin ligase complex | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G030780.7 | No alias | substrate adaptor of SCF E3 ubiquitin ligase complex | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Predicted GO |
CC | GO:0005778 | peroxisomal membrane | IEP | Predicted GO |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
BP | GO:0007031 | peroxisome organization | IEP | Predicted GO |
MF | GO:0016409 | palmitoyltransferase activity | IEP | Predicted GO |
CC | GO:0031090 | organelle membrane | IEP | Predicted GO |
CC | GO:0031903 | microbody membrane | IEP | Predicted GO |
CC | GO:0042579 | microbody | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044438 | microbody part | IEP | Predicted GO |
CC | GO:0044439 | peroxisomal part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
CC | GO:0098805 | whole membrane | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001810 | F-box_dom | 11 | 41 |
No external refs found! |