Brara.C02987.1

Description : S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase

Gene families : OG_42_0001259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001259_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C02987.1
Cluster	HCAA Clusters: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
106449	No alias	Adenosylmethionine decarboxylase family protein	0.02	Orthogroups_2024-Update
A4A49_21239	No alias	s-adenosylmethionine decarboxylase proenzyme	0.03	Orthogroups_2024-Update
A4A49_31954	No alias	s-adenosylmethionine decarboxylase proenzyme	0.04	Orthogroups_2024-Update
At3g02470	No alias	S-adenosylmethionine decarboxylase proenzyme 1...	0.09	Orthogroups_2024-Update
At5g15950	No alias	S-adenosylmethionine decarboxylase proenzyme 2...	0.04	Orthogroups_2024-Update
Bradi5g14640	No alias	Adenosylmethionine decarboxylase family protein	0.04	Orthogroups_2024-Update
Brara.A03903.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.07	Orthogroups_2024-Update
Brara.J01921.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
GRMZM2G125635	No alias	Adenosylmethionine decarboxylase family protein	0.04	Orthogroups_2024-Update
GRMZM2G154397	No alias	Adenosylmethionine decarboxylase family protein	0.03	Orthogroups_2024-Update
GRMZM2G366392	No alias	Adenosylmethionine decarboxylase family protein	0.03	Orthogroups_2024-Update
Glyma.01G071300	No alias	Adenosylmethionine decarboxylase family protein	0.05	Orthogroups_2024-Update
Glyma.02G128000	No alias	Adenosylmethionine decarboxylase family protein	0.03	Orthogroups_2024-Update
Glyma.08G255800	No alias	S-adenosylmethionine decarboxylase	0.02	Orthogroups_2024-Update
HORVU2Hr1G086140.5	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.04	Orthogroups_2024-Update
HORVU6Hr1G056110.3	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
MA_10434945g0010	No alias	(q9axe3\|dcam_dauca : 384.0) S-adenosylmethionine...	0.03	Orthogroups_2024-Update
MA_75633g0020	No alias	(q96471\|dcam_iponi : 422.0) S-adenosylmethionine...	0.02	Orthogroups_2024-Update
MA_9879049g0010	No alias	(q9axe3\|dcam_dauca : 330.0) S-adenosylmethionine...	0.03	Orthogroups_2024-Update
Mp1g22070.1	No alias	ornithine decarboxylase. S-adenosyl methionine decarboxylase	0.02	Orthogroups_2024-Update
Potri.017G108800	No alias	S-adenosylmethionine decarboxylase	0.03	Orthogroups_2024-Update
Pp1s187_30V6	No alias	s-adenosylmethionine decarboxylase	0.05	Orthogroups_2024-Update
Pp1s335_22V6	No alias	s-adenosylmethionine decarboxylase	0.03	Orthogroups_2024-Update
Seita.7G154200.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
Sobic.004G211900.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.02	Orthogroups_2024-Update
Sobic.006G135600.4	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.05	Orthogroups_2024-Update
Solyc02g089610	No alias	S-adenosylmethionine decarboxylase 2	0.09	Orthogroups_2024-Update
Solyc05g010420	No alias	S-adenosylmethionine decarboxylase proenzyme (AHRD V3.3...	0.04	Orthogroups_2024-Update
Sopen01g005600	No alias	Adenosylmethionine decarboxylase	0.02	Orthogroups_2024-Update
Sopen02g034330	No alias	Adenosylmethionine decarboxylase	0.05	Orthogroups_2024-Update
Sopen05g006210	No alias	Adenosylmethionine decarboxylase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEA	16Dec
BP	GO:0006576	cellular biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006596	polyamine biosynthetic process	None	Extended
BP	GO:0006597	spermine biosynthetic process	IEA	16Dec
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008215	spermine metabolic process	None	Extended
BP	GO:0008216	spermidine metabolic process	None	Extended
BP	GO:0008295	spermidine biosynthetic process	IEA	16Dec
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009309	amine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042401	cellular biogenic amine biosynthetic process	None	Extended
BP	GO:0044106	cellular amine metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097164	ammonium ion metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004096	catalase activity	IEP	Predicted GO
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Predicted GO
MF	GO:0004594	pantothenate kinase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
CC	GO:0005875	microtubule associated complex	IEP	Predicted GO
BP	GO:0006865	amino acid transport	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	Predicted GO
BP	GO:0017007	protein-bilin linkage	IEP	Predicted GO
BP	GO:0017009	protein-phycocyanobilin linkage	IEP	Predicted GO
CC	GO:0030286	dynein complex	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
BP	GO:0098656	anion transmembrane transport	IEP	Predicted GO
BP	GO:1903825	organic acid transmembrane transport	IEP	Predicted GO
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001985	S-AdoMet_decarboxylase	7	252

External Links

No external refs found!

Brara.C02987.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation