Description : organellar tyrosine-tRNA ligase
Gene families : OG_42_0005753 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005753_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.C03003.1 | |
Cluster | HCAA Clusters: Cluster_118 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g02660 | No alias | Tyrosine--tRNA ligase [Source:UniProtKB/TrEMBL;Acc:A0A178VAQ8] | 0.05 | Orthogroups_2024-Update | |
Bradi3g28520 | No alias | Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G040170.2 | No alias | organellar tyrosine-tRNA ligase | 0.02 | Orthogroups_2024-Update | |
Kfl00181_0140 | kfl00181_0140_v1.1 | (at3g02660 : 472.0) EMBRYO DEFECTIVE 2768 (emb2768);... | 0.02 | Orthogroups_2024-Update | |
Pp1s1_515V6 | No alias | tyrosyl-trna synthetase | 0.04 | Orthogroups_2024-Update | |
evm.model.tig00001388.17 | No alias | (at3g02660 : 268.0) EMBRYO DEFECTIVE 2768 (emb2768);... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEA | 16Dec |
MF | GO:0003723 | RNA binding | IEA | 16Dec |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEA | 16Dec |
MF | GO:0005524 | ATP binding | IEA | 16Dec |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Predicted GO |
MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006189 | 'de novo' IMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0008104 | protein localization | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0008235 | metalloexopeptidase activity | IEP | Predicted GO |
MF | GO:0008237 | metallopeptidase activity | IEP | Predicted GO |
MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0015031 | protein transport | IEP | Predicted GO |
BP | GO:0015833 | peptide transport | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
MF | GO:0030145 | manganese ion binding | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0042886 | amide transport | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
MF | GO:0070006 | metalloaminopeptidase activity | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No external refs found! |