1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C03004.1

Brara.C03004.1


Description : clade E phosphatase


Gene families : OG_42_0000218 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03004.1
Cluster HCAA Clusters: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
A4A49_20134 No alias putative protein phosphatase 2c 52 0.05 Orthogroups_2024-Update
A4A49_35919 No alias putative protein phosphatase 2c 34 0.03 Orthogroups_2024-Update
Brara.I00449.1 No alias clade E phosphatase 0.05 Orthogroups_2024-Update
Brara.K00678.1 No alias clade E phosphatase 0.04 Orthogroups_2024-Update
Cre03.g170250 No alias Protein phosphatase 2C family protein 0.02 Orthogroups_2024-Update
Glyma.07G244700 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G059140.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G039940.1 No alias clade E phosphatase 0.03 Orthogroups_2024-Update
LOC_Os11g01790 No alias protein phosphatase 2c, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s7_59V6 No alias protein phosphatase- 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 179 366
No external refs found!