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  5. Brara.C03072.1

Brara.C03072.1


Description : Unknown function


Gene families : OG_42_0001762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001762_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03072.1
Cluster HCAA Clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
At3g04720 No alias Hevein-like preproprotein... 0.04 Orthogroups_2024-Update
Bradi4g14920 No alias pathogenesis-related 4 0.03 Orthogroups_2024-Update
GRMZM2G117971 No alias pathogenesis-related 4 0.03 Orthogroups_2024-Update
Glyma.03G247500 No alias pathogenesis-related 4 0.03 Orthogroups_2024-Update
Glyma.20G225200 No alias pathogenesis-related 4 0.03 Orthogroups_2024-Update
HORVU2Hr1G120530.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os11g37970 No alias WIP5 - Wound-induced protein precursor, expressed 0.02 Orthogroups_2024-Update
MA_10428528g0010 No alias (at3g04720 : 124.0) Encodes a protein similar to the... 0.03 Orthogroups_2024-Update
MA_321399g0010 No alias (p09761|win1_soltu : 201.0) Wound-induced protein WIN1... 0.03 Orthogroups_2024-Update
PSME_00009548-RA No alias (p29063|pr4b_tobac : 131.0) Pathogenesis-related protein... 0.03 Orthogroups_2024-Update
PSME_00054279-RA No alias (p09761|win1_soltu : 201.0) Wound-induced protein WIN1... 0.03 Orthogroups_2024-Update
Seita.8G170000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G170100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g040950 No alias Barwin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA 16Dec
BP GO:0042742 defense response to bacterium IEA 16Dec
BP GO:0050832 defense response to fungus IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 23 62
IPR001153 Barwin_dom 74 192
No external refs found!