Brara.C03088.1

Description : effector receptor *(NLR)

Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C03088.1
Cluster	HCAA Clusters: Cluster_196

Target	Alias	Description	ECC score	Gene Family Method
At1g64070	No alias	Disease resistance protein RML1A...	0.02	Orthogroups_2024-Update
Cre01.g047500	No alias	plant intracellular ras group-related LRR 2	0.01	Orthogroups_2024-Update
Glyma.06G260100	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Glyma.16G159550	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Potri.T011750	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Potri.T038900	No alias	transmembrane receptors;ATP binding	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0007165	signal transduction	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
BP	GO:0006397	mRNA processing	IEP	Predicted GO
BP	GO:0006486	protein glycosylation	IEP	Predicted GO
BP	GO:0009605	response to external stimulus	IEP	Predicted GO
BP	GO:0009606	tropism	IEP	Predicted GO
BP	GO:0010274	hydrotropism	IEP	Predicted GO
BP	GO:0016071	mRNA metabolic process	IEP	Predicted GO
MF	GO:0016791	phosphatase activity	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
CC	GO:0030117	membrane coat	IEP	Predicted GO
BP	GO:0043413	macromolecule glycosylation	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
BP	GO:0070085	glycosylation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	73	248
IPR002182	NB-ARC	251	465
IPR011713	Leu-rich_rpt_3	598	617

External Links

No external refs found!