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  5. Brara.C03115.1

Brara.C03115.1


Description : effector receptor *(NLR)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03115.1
Cluster HCAA Clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
A4A49_33079 No alias tmv resistance protein n 0.02 Orthogroups_2024-Update
At3g44480 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g38850 No alias Disease resistance protein (TIR-NBS-LRR class)... 0.03 Orthogroups_2024-Update
Brara.H02461.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
MA_9108027g0010 No alias (at1g27170 : 149.0) transmembrane receptors;ATP binding;... 0.03 Orthogroups_2024-Update
MA_928125g0010 No alias (at5g36930 : 187.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_9969164g0010 No alias (at1g27180 : 245.0) disease resistance protein... 0.03 Orthogroups_2024-Update
Potri.014G064300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA 16Dec
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000157 TIR_dom 18 193
IPR002182 NB-ARC 198 435
IPR011713 Leu-rich_rpt_3 609 628
No external refs found!