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  5. Brara.C03149.1

Brara.C03149.1


Description : E3 ubiquitin ligase


Gene families : OG_42_0001073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03149.1
Cluster HCAA Clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
A4A49_09553 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi1g32600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
PSME_00000942-RA No alias (at5g60580 : 219.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 230 276
No external refs found!