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  5. Brara.C03158.1

Brara.C03158.1


Description : MYB class-R2R3 subgroup-19/20 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03158.1
Cluster HCAA Clusters: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
At1g08810 No alias MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25] 0.04 Orthogroups_2024-Update
At5g06100 No alias Transcription factor MYB33... 0.05 Orthogroups_2024-Update
Bradi2g05740 No alias myb domain protein 37 0.03 Orthogroups_2024-Update
Brara.B00568.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.C00664.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03210.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.12G237500 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.13G050400 No alias myb domain protein 83 0.05 Orthogroups_2024-Update
LOC_Os02g40530 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g49310 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.002G275500.3 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G155900.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G177100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc01g079620 No alias colorless fruit epidermis 0.03 Orthogroups_2024-Update
Sopen07g003890 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen10g032000 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 21 68
IPR001005 SANT/Myb 74 117
No external refs found!