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  5. Brara.C03268.1

Brara.C03268.1


Description : component *(uL29) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03268.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
438324 No alias Ribosomal L29 family protein 0.21 Orthogroups_2024-Update
A4A49_28237 No alias 60s ribosomal protein l35-4 0.21 Orthogroups_2024-Update
A4A49_63512 No alias 60s ribosomal protein l35-4 0.14 Orthogroups_2024-Update
AC206642.4_FG001 No alias Ribosomal L29 family protein 0.09 Orthogroups_2024-Update
At2g39390 No alias 60S ribosomal protein L35-2... 0.11 Orthogroups_2024-Update
Bradi3g43840 No alias Ribosomal L29 family protein 0.07 Orthogroups_2024-Update
Bradi5g07170 No alias Ribosomal L29 family protein 0.19 Orthogroups_2024-Update
Brara.A03526.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.26 Orthogroups_2024-Update
Brara.B00059.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.C02014.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.J02866.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Cre14.g617900 No alias Ribosomal L29 family protein 0.38 Orthogroups_2024-Update
GRMZM2G043279 No alias Ribosomal L29 family protein 0.08 Orthogroups_2024-Update
Glyma.10G291500 No alias Ribosomal L29 family protein 0.2 Orthogroups_2024-Update
Glyma.13G133900 No alias Ribosomal L29 family protein 0.1 Orthogroups_2024-Update
Glyma.20G240700 No alias Ribosomal L29 family protein 0.19 Orthogroups_2024-Update
HORVU2Hr1G068120.2 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Kfl00608_0050 kfl00608_0050_v1.1 (at5g02610 : 177.0) Ribosomal L29 family protein ;... 0.15 Orthogroups_2024-Update
MA_10429159g0020 No alias (at5g02610 : 210.0) Ribosomal L29 family protein ;... 0.11 Orthogroups_2024-Update
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.22 Orthogroups_2024-Update
PSME_00020825-RA No alias (at5g02610 : 157.0) Ribosomal L29 family protein ;... 0.2 Orthogroups_2024-Update
PSME_00033304-RA No alias (at5g02610 : 177.0) Ribosomal L29 family protein ;... 0.07 Orthogroups_2024-Update
Potri.006G214200 No alias Ribosomal L29 family protein 0.03 Orthogroups_2024-Update
Potri.008G048800 No alias Ribosomal L29 family protein 0.1 Orthogroups_2024-Update
Potri.010G212300 No alias Ribosomal L29 family protein 0.13 Orthogroups_2024-Update
Pp1s102_67V6 No alias 60s ribosomal protein l35 0.15 Orthogroups_2024-Update
Pp1s133_93V6 No alias 60s ribosomal protein l35 0.19 Orthogroups_2024-Update
Pp1s1_489V6 No alias 60s ribosomal protein l35 0.25 Orthogroups_2024-Update
Seita.1G166300.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Seita.7G064700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.27 Orthogroups_2024-Update
Sobic.004G152400.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.3 Orthogroups_2024-Update
Sobic.004G152700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.35 Orthogroups_2024-Update
Solyc04g010240 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.26 Orthogroups_2024-Update
Solyc05g054810 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.33 Orthogroups_2024-Update
Solyc06g075620 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.03 Orthogroups_2024-Update
Sopen04g005430 No alias Ribosomal L29 protein 0.13 Orthogroups_2024-Update
Sopen05g033280 No alias Ribosomal L29 protein 0.16 Orthogroups_2024-Update
evm.model.contig_654.2 No alias (at5g02610 : 134.0) Ribosomal L29 family protein ;... 0.34 Orthogroups_2024-Update
evm.model.tig00000241.79 No alias (at3g55170 : 158.0) Ribosomal L29 family protein ;... 0.18 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004017 adenylate kinase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 64
No external refs found!