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  5. Brara.C03316.1

Brara.C03316.1


Description : Unknown function


Gene families : OG_42_0001049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03316.1
Cluster HCAA Clusters: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
Bradi3g55540 No alias pumilio 4 0.02 Orthogroups_2024-Update
Cre17.g746647 No alias pumilio 3 0.02 Orthogroups_2024-Update
Kfl00880_0010 kfl00880_0010_v1.1 (at2g29200 : 533.0) Encodes a member of the Arabidopsis... 0.01 Orthogroups_2024-Update
MA_12280g0010 No alias (at2g29200 : 547.0) Encodes a member of the Arabidopsis... 0.03 Orthogroups_2024-Update
MA_23070g0010 No alias (at2g29200 : 676.0) Encodes a member of the Arabidopsis... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR012940 NABP 299 647
IPR001313 Pumilio_RNA-bd_rpt 797 831
IPR001313 Pumilio_RNA-bd_rpt 724 757
IPR001313 Pumilio_RNA-bd_rpt 767 791
IPR001313 Pumilio_RNA-bd_rpt 691 721
IPR001313 Pumilio_RNA-bd_rpt 652 686
IPR001313 Pumilio_RNA-bd_rpt 869 903
IPR001313 Pumilio_RNA-bd_rpt 915 944
IPR001313 Pumilio_RNA-bd_rpt 834 866
No external refs found!