Brara.C03370.1

Description : Unknown function

Gene families : OG_42_0002934 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002934_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C03370.1
Cluster	HCAA Clusters: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
At1g32410	No alias	Vacuolar protein sorting-associated protein 55 homolog...	0.03	Orthogroups_2024-Update
At3g11530	No alias	Vacuolar protein sorting 55 (VPS55) family protein...	0.03	Orthogroups_2024-Update
Potri.003G087500	No alias	Vacuolar protein sorting 55 (VPS55) family protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription regulatory region sequence-specific DNA binding	IEP	Predicted GO
MF	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	IEP	Predicted GO
MF	GO:0001012	RNA polymerase II regulatory region DNA binding	IEP	Predicted GO
MF	GO:0001067	regulatory region nucleic acid binding	IEP	Predicted GO
BP	GO:0002376	immune system process	IEP	Predicted GO
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0006955	immune response	IEP	Predicted GO
MF	GO:0032422	purine-rich negative regulatory element binding	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
MF	GO:0044212	transcription regulatory region DNA binding	IEP	Predicted GO
BP	GO:0045087	innate immune response	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR007262	VPS55	2	106

External Links

No external refs found!