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  5. Brara.C03410.1

Brara.C03410.1


Description : subunit alpha of NAC ribosome-associated chaperone complex


Gene families : OG_42_0001317 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03410.1
Cluster HCAA Clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
102471 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.07 Orthogroups_2024-Update
A4A49_22902 No alias nascent polypeptide-associated complex subunit... 0.05 Orthogroups_2024-Update
A4A49_38481 No alias nascent polypeptide-associated complex subunit... 0.06 Orthogroups_2024-Update
Bradi1g62360 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.08 Orthogroups_2024-Update
Bradi2g27190 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.07 Orthogroups_2024-Update
Brara.A03346.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.06 Orthogroups_2024-Update
Brara.G01079.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.13 Orthogroups_2024-Update
GRMZM2G171466 No alias nascent polypeptide-associated complex subunit... 0.02 Orthogroups_2024-Update
Glyma.04G227300 No alias nascent polypeptide-associated complex subunit... 0.08 Orthogroups_2024-Update
Glyma.06G137800 No alias nascent polypeptide-associated complex subunit... 0.06 Orthogroups_2024-Update
HORVU1Hr1G057970.2 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.06 Orthogroups_2024-Update
LOC_Os05g31000 No alias nascent polypeptide-associated complex subunit alpha,... 0.02 Orthogroups_2024-Update
MA_10432925g0010 No alias (at3g12390 : 220.0) Nascent polypeptide-associated... 0.05 Orthogroups_2024-Update
PSME_00019388-RA No alias (at3g12390 : 186.0) Nascent polypeptide-associated... 0.05 Orthogroups_2024-Update
Potri.001G034400 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.04 Orthogroups_2024-Update
Potri.003G190800 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.03 Orthogroups_2024-Update
Pp1s10_319V6 No alias T2E22.29; nascent polypeptide associated complex alpha... 0.13 Orthogroups_2024-Update
Pp1s122_100V6 No alias nascent polypeptide associated complex alpha chain 0.19 Orthogroups_2024-Update
Pp1s156_120V6 No alias T2E22.29; nascent polypeptide associated complex alpha... 0.05 Orthogroups_2024-Update
Seita.9G403300.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.12 Orthogroups_2024-Update
Sobic.001G371400.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.16 Orthogroups_2024-Update
Sobic.007G192700.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.21 Orthogroups_2024-Update
Solyc03g080160 No alias Nascent polypeptide associated complex alpha subunit,... 0.05 Orthogroups_2024-Update
Solyc10g081030 No alias Nascent polypeptide-associated complex subunit... 0.07 Orthogroups_2024-Update
Sopen03g021890 No alias NAC domain 0.08 Orthogroups_2024-Update
Sopen10g031540 No alias NAC domain 0.09 Orthogroups_2024-Update
evm.model.contig_4451.2 No alias (at3g49470 : 132.0) nascent polypeptide-associated... 0.3 Orthogroups_2024-Update
evm.model.tig00000842.56 No alias (at5g13850 : 196.0) nascent polypeptide-associated... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002715 Nas_poly-pep-assoc_cplx_dom 59 114
No external refs found!