1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C03425.1

Brara.C03425.1


Description : Unknown function


Gene families : OG_42_0000255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03425.1
Cluster HCAA Clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
At3g52800 No alias A20/AN1-like zinc finger family protein... 0.04 Orthogroups_2024-Update
Brara.K01358.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G071042 No alias A20/AN1-like zinc finger family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G050270.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.009G063900 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
Solyc10g083460 No alias Zinc finger A20 and AN1 domain-containing... 0.05 Orthogroups_2024-Update
Solyc12g100060 No alias Zinc finger A20 and AN1 domain-containing... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000058 Znf_AN1 99 136
IPR002653 Znf_A20 27 49
No external refs found!