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  5. Brara.C03441.1

Brara.C03441.1


Description : E3 ubiquitin ligase *(BRG)


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.C03441.1
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
At3g12920 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 Orthogroups_2024-Update
Bradi3g52030 No alias SBP (S-ribonuclease binding protein) family protein 0.02 Orthogroups_2024-Update
Bradi5g08760 No alias SBP (S-ribonuclease binding protein) family protein 0.02 Orthogroups_2024-Update
Glyma.08G170400 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Glyma.11G091300 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Sobic.001G141600.1 No alias E3 ubiquitin ligase *(BRG) 0.03 Orthogroups_2024-Update
Sobic.001G293600.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!