Description : chaperone *(Hsp60)
Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.C03496.1 | |
Cluster | HCAA Clusters: Cluster_114 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
165043 | No alias | TCP-1/cpn60 chaperonin family protein | 0.04 | Orthogroups_2024-Update | |
405358 | No alias | heat shock protein 60 | 0.03 | Orthogroups_2024-Update | |
AC215201.3_FG005 | No alias | chaperonin-60alpha | 0.03 | Orthogroups_2024-Update | |
At2g28000 | No alias | SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6] | 0.03 | Orthogroups_2024-Update | |
At2g33210 | No alias | Chaperonin CPN60-like 1, mitochondrial... | 0.06 | Orthogroups_2024-Update | |
At3g13470 | No alias | Chaperonin 60 subunit beta 2, chloroplastic... | 0.05 | Orthogroups_2024-Update | |
At3g13860 | No alias | Chaperonin CPN60-like 2, mitochondrial... | 0.06 | Orthogroups_2024-Update | |
At3g23990 | No alias | Chaperonin CPN60, mitochondrial... | 0.06 | Orthogroups_2024-Update | |
At5g56500 | No alias | Chaperonin 60 subunit beta 3, chloroplastic... | 0.05 | Orthogroups_2024-Update | |
Bradi2g18260 | No alias | heat shock protein 60-3A | 0.04 | Orthogroups_2024-Update | |
Bradi4g38090 | No alias | TCP-1/cpn60 chaperonin family protein | 0.1 | Orthogroups_2024-Update | |
Brara.B00789.1 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.04 | Orthogroups_2024-Update | |
Brara.C03936.1 | No alias | chaperone *(Hsp60) | 0.03 | Orthogroups_2024-Update | |
Brara.H00053.1 | No alias | chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... | 0.03 | Orthogroups_2024-Update | |
Cre06.g309100 | No alias | heat shock protein 60 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G083716 | No alias | chaperonin 60 beta | 0.03 | Orthogroups_2024-Update | |
GRMZM2G416120 | No alias | heat shock protein 60 | 0.07 | Orthogroups_2024-Update | |
GRMZM2G434173 | No alias | chaperonin-60alpha | 0.04 | Orthogroups_2024-Update | |
Glyma.07G009600 | No alias | heat shock protein 60-3A | 0.09 | Orthogroups_2024-Update | |
Glyma.10G127800 | No alias | heat shock protein 60 | 0.09 | Orthogroups_2024-Update | |
Glyma.11G195900 | No alias | chaperonin-60alpha | 0.04 | Orthogroups_2024-Update | |
Glyma.12G078100 | No alias | chaperonin-60alpha | 0.05 | Orthogroups_2024-Update | |
Glyma.15G250500 | No alias | TCP-1/cpn60 chaperonin family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.20G079300 | No alias | heat shock protein 60 | 0.06 | Orthogroups_2024-Update | |
Glyma.20G197100 | No alias | heat shock protein 60 | 0.04 | Orthogroups_2024-Update | |
HORVU0Hr1G038830.19 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.07 | Orthogroups_2024-Update | |
HORVU1Hr1G038680.8 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
HORVU2Hr1G007840.7 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.04 | Orthogroups_2024-Update | |
Kfl00076_0150 | kfl00076_0150_v1.... | (p08927|rubb_pea : 851.0) RuBisCO large subunit-binding... | 0.05 | Orthogroups_2024-Update | |
Kfl00113_0150 | kfl00113_0150_v1.1 | (p08926|ruba_pea : 818.0) RuBisCO large subunit-binding... | 0.03 | Orthogroups_2024-Update | |
Kfl00292_0140 | kfl00292_0140_v1.1 | (q05046|ch62_cucma : 837.0) Chaperonin CPN60-2,... | 0.01 | Orthogroups_2024-Update | |
MA_10436324g0010 | No alias | (at3g23990 : 851.0) mitochondrial chaperonin HSP. assist... | 0.08 | Orthogroups_2024-Update | |
PSME_00000058-RA | No alias | (at3g13470 : 709.0) TCP-1/cpn60 chaperonin family... | 0.03 | Orthogroups_2024-Update | |
PSME_00000537-RA | No alias | (p21239|rub1_brana : 764.0) RuBisCO large... | 0.03 | Orthogroups_2024-Update | |
PSME_00008710-RA | No alias | (q05046|ch62_cucma : 823.0) Chaperonin CPN60-2,... | 0.03 | Orthogroups_2024-Update | |
PSME_00016110-RA | No alias | (p08926|ruba_pea : 852.0) RuBisCO large subunit-binding... | 0.05 | Orthogroups_2024-Update | |
Potri.001G054400 | No alias | heat shock protein 60 | 0.06 | Orthogroups_2024-Update | |
Potri.002G252900 | No alias | heat shock protein 60 | 0.04 | Orthogroups_2024-Update | |
Potri.003G173900 | No alias | heat shock protein 60 | 0.05 | Orthogroups_2024-Update | |
Potri.004G213400 | No alias | chaperonin-60alpha | 0.03 | Orthogroups_2024-Update | |
Pp1s276_75V6 | No alias | ru large subunit-binding protein subunit beta | 0.03 | Orthogroups_2024-Update | |
Pp1s52_245V6 | No alias | -like atpase | 0.03 | Orthogroups_2024-Update | |
Seita.2G129300.1 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.05 | Orthogroups_2024-Update | |
Seita.3G163700.1 | No alias | chaperone *(Hsp60) | 0.03 | Orthogroups_2024-Update | |
Seita.9G231400.1 | No alias | chaperone *(Hsp60) | 0.08 | Orthogroups_2024-Update | |
Sobic.001G228200.1 | No alias | chaperone *(Hsp60) | 0.08 | Orthogroups_2024-Update | |
Sobic.002G131000.1 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.03 | Orthogroups_2024-Update | |
Solyc02g068730 | No alias | Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) | 0.07 | Orthogroups_2024-Update | |
Solyc03g121640 | No alias | Chaperonin Cpn60 (AHRD V3.3 *** A0A124SDT3_CYNCS) | 0.05 | Orthogroups_2024-Update | |
Solyc05g053470 | No alias | Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) | 0.03 | Orthogroups_2024-Update | |
Solyc09g091180 | No alias | Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) | 0.12 | Orthogroups_2024-Update | |
Solyc11g069790 | No alias | Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) | 0.03 | Orthogroups_2024-Update | |
Sopen01g016850 | No alias | TCP-1/cpn60 chaperonin family | 0.08 | Orthogroups_2024-Update | |
Sopen03g039670 | No alias | TCP-1/cpn60 chaperonin family | 0.02 | Orthogroups_2024-Update | |
Sopen03g040450 | No alias | TCP-1/cpn60 chaperonin family | 0.03 | Orthogroups_2024-Update | |
Sopen05g031970 | No alias | TCP-1/cpn60 chaperonin family | 0.05 | Orthogroups_2024-Update | |
Sopen09g034150 | No alias | TCP-1/cpn60 chaperonin family | 0.06 | Orthogroups_2024-Update | |
Sopen11g028490 | No alias | TCP-1/cpn60 chaperonin family | 0.06 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004018 | N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | IEP | Predicted GO |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016597 | amino acid binding | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002423 | Cpn60/TCP-1 | 53 | 547 |
No external refs found! |