Brara.C03549.1

Description : PEP carboxylase *(PPC)

Gene families : OG_42_0000687 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C03549.1
Cluster	HCAA Clusters: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g06620	No alias	phosphoenolpyruvate carboxylase 3	0.03	Orthogroups_2024-Update
Cre03.g171950	No alias	phosphoenolpyruvate carboxylase 4	0.01	Orthogroups_2024-Update
Mp1g16440.1	No alias	PEP carboxylase	0.03	Orthogroups_2024-Update
PSME_00035684-RA	No alias	(at1g68750 : 227.0) Encodes one of four Arabidopsis...	0.02	Orthogroups_2024-Update
PSME_00045881-RA	No alias	(at1g68750 : 100.0) Encodes one of four Arabidopsis...	0.02	Orthogroups_2024-Update
Sobic.004G106900.1	No alias	PEP carboxylase *(PPC) & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
Solyc12g014250	No alias	Phosphoenolpyruvate carboxylase (AHRD V3.3 *** CAPP_SOLTU)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006099	tricarboxylic acid cycle	IEA	16Dec
BP	GO:0006101	citrate metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEA	16Dec
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015977	carbon fixation	IEA	16Dec
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0016999	antibiotic metabolic process	None	Extended
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072350	tricarboxylic acid metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predicted GO
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	Predicted GO
MF	GO:0004645	phosphorylase activity	IEP	Predicted GO
BP	GO:0006555	methionine metabolic process	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
MF	GO:0008184	glycogen phosphorylase activity	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR021135	PEP_COase	334	616
IPR021135	PEP_COase	35	331

External Links

No external refs found!