Brara.C03560.1

Description : NAC-type transcription factor

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C03560.1
Cluster	HCAA Clusters: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
At2g18060	No alias	VND1 [Source:UniProtKB/TrEMBL;Acc:A0A178VM15]	0.02	Orthogroups_2024-Update
At2g24430	No alias	NAC domain containing protein 38...	0.04	Orthogroups_2024-Update
At3g61910	No alias	NAC domain-containing protein 66...	0.02	Orthogroups_2024-Update
At4g35580	No alias	NAC transcription factor-like 9 [Source:TAIR;Acc:AT4G35580]	0.04	Orthogroups_2024-Update
At5g18270	No alias	NAC domain-containing protein 87...	0.02	Orthogroups_2024-Update
At5g66300	No alias	NAC domain-containing protein 105...	0.03	Orthogroups_2024-Update
Bradi1g17440	No alias	Arabidopsis NAC domain containing protein 87	0.06	Orthogroups_2024-Update
Bradi1g52187	No alias	Arabidopsis NAC domain containing protein 26	0.05	Orthogroups_2024-Update
Bradi3g09520	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Bradi3g13727	No alias	NAC (No Apical Meristem) domain transcriptional...	0.05	Orthogroups_2024-Update
Bradi3g33957	No alias	NAC domain containing protein 71	0.04	Orthogroups_2024-Update
Bradi4g37327	No alias	NAC domain containing protein 57	0.04	Orthogroups_2024-Update
Bradi4g43995	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Brara.B00259.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C00996.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D01471.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.H00641.1	No alias	NAC-type transcription factor	0.05	Orthogroups_2024-Update
Brara.I00566.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.J02533.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Glyma.02G050100	No alias	vascular related NAC-domain protein 1	0.03	Orthogroups_2024-Update
Glyma.12G161700	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Orthogroups_2024-Update
Glyma.14G189300	No alias	NAC transcription factor-like 9	0.04	Orthogroups_2024-Update
HORVU2Hr1G017400.3	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
HORVU2Hr1G127510.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
HORVU2Hr1G127550.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
HORVU4Hr1G085320.4	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
HORVU5Hr1G045640.7	No alias	NAC-type transcription factor	0.05	Orthogroups_2024-Update
LOC_Os02g42970	No alias	NAC domain containing protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g03540	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g21030	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g01330	No alias	no apical meristem protein, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os09g32260	No alias	no apical meristem protein, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os11g03370	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
Mp4g22890.1	No alias	transcription factor (NAC)	0.01	Orthogroups_2024-Update
PSME_00009079-RA	No alias	(at1g65910 : 290.0) NAC domain containing protein 28...	0.02	Orthogroups_2024-Update
PSME_00030678-RA	No alias	(at1g65910 : 262.0) NAC domain containing protein 28...	0.02	Orthogroups_2024-Update
PSME_00036702-RA	No alias	(at1g65910 : 280.0) NAC domain containing protein 28...	0.06	Orthogroups_2024-Update
PSME_00049694-RA	No alias	(at2g18060 : 259.0) Encodes a NAC-domain transcription...	0.04	Orthogroups_2024-Update
Potri.001G396300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Orthogroups_2024-Update
Potri.012G001400	No alias	NAC domain containing protein 100	0.02	Orthogroups_2024-Update
Potri.013G054200	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
Potri.018G003800	No alias	NAC domain containing protein 38	0.03	Orthogroups_2024-Update
Pp1s161_73V6	No alias	nac domain-containing	0.05	Orthogroups_2024-Update
Pp1s164_37V6	No alias	nac domain ipr003441	0.03	Orthogroups_2024-Update
Pp1s1_447V6	No alias	nac domain ipr003441	0.03	Orthogroups_2024-Update
Pp1s227_100V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Pp1s44_300V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Pp1s70_104V6	No alias	nac domain-containing	0.03	Orthogroups_2024-Update
Pp1s73_182V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Seita.9G165600.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G557600.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Seita.9G564000.1	No alias	NAC-type transcription factor	0.06	Orthogroups_2024-Update
Sobic.001G386000.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G302400.3	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G281900.3	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.010G155000.2	No alias	NAC-type transcription factor	0.07	Orthogroups_2024-Update
Solyc03g098190	No alias	NAC domain protein (AHRD V3.3 *** A0A0K9PDJ8_ZOSMR)	0.02	Orthogroups_2024-Update
Solyc03g115850	No alias	NAC domain-containing protein	0.03	Orthogroups_2024-Update
Solyc06g069710	No alias	NAC domain protein, (AHRD V3.3 *** A0A061FWI7_THECC)	0.06	Orthogroups_2024-Update
Solyc08g006020	No alias	NAC domain protein, (AHRD V3.3 - A0A061F8R9_THECC)	0.02	Orthogroups_2024-Update
Solyc11g008000	No alias	NAC domain protein, (AHRD V3.3 *** A0A061FNG1_THECC)	0.05	Orthogroups_2024-Update
Sopen06g029400	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update
Sopen11g009640	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005984	disaccharide metabolic process	IEP	Predicted GO
BP	GO:0005991	trehalose metabolic process	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predicted GO
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	21	147

External Links

No external refs found!

Brara.C03560.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation