1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C03574.1

Brara.C03574.1


Description : transcriptional repressor *(IAA/AUX)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03574.1
Cluster HCAA Clusters: Cluster_340

Target Alias Description ECC score Gene Family Method Actions
A4A49_38992 No alias auxin-responsive protein iaa26 0.03 Orthogroups_2024-Update
At5g65670 No alias Auxin-responsive protein IAA9... 0.06 Orthogroups_2024-Update
Brara.B03964.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.I00828.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Glyma.05G229300 No alias phytochrome-associated protein 2 0.03 Orthogroups_2024-Update
Glyma.09G193000 No alias phytochrome-associated protein 2 0.04 Orthogroups_2024-Update
Glyma.10G031900 No alias indole-3-acetic acid 7 0.03 Orthogroups_2024-Update
Glyma.20G225000 No alias indoleacetic acid-induced protein 16 0.03 Orthogroups_2024-Update
HORVU7Hr1G084940.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
LOC_Os01g08320 No alias OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g43400 No alias OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g09480 No alias OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g08460 No alias OsIAA24 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g40890 No alias OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
PSME_00042684-RA No alias (at4g14550 : 201.0) IAA14 is a member of the Aux/IAA... 0.03 Orthogroups_2024-Update
Potri.018G057000 No alias phytochrome-associated protein 1 0.03 Orthogroups_2024-Update
Seita.5G268600.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Solyc09g090910 No alias auxin-regulated IAA13 0.04 Orthogroups_2024-Update
Solyc12g096980 No alias auxin-regulated IAA11 0.02 Orthogroups_2024-Update
Sopen09g025690 No alias AUX/IAA family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 49 92
No external refs found!