Brara.C03630.1

Description : pectin methylesterase

Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C03630.1
Cluster	HCAA Clusters: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
At1g11590	No alias	Probable pectinesterase/pectinesterase inhibitor 19...	0.03	Orthogroups_2024-Update
Bradi3g17880	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Brara.B00244.1	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
Glyma.07G125100	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os11g45730	No alias	pectinesterase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g37660	No alias	pectinesterase, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00045263-RA	No alias	(at5g19730 : 435.0) Pectin lyase-like superfamily...	0.03	Orthogroups_2024-Update
Solyc07g043240	No alias	Pectinesterase (AHRD V3.3 *** K4CEI4_SOLLC)	0.03	Orthogroups_2024-Update
Sopen07g022810	No alias	Pectinesterase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	16Dec
BP	GO:0042545	cell wall modification	IEA	16Dec
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Predicted GO
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Predicted GO
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Predicted GO
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predicted GO
MF	GO:0004620	phospholipase activity	IEP	Predicted GO
MF	GO:0004629	phospholipase C activity	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predicted GO
MF	GO:0008374	O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016298	lipase activity	IEP	Predicted GO
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Predicted GO
CC	GO:0016459	myosin complex	IEP	Predicted GO
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predicted GO
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	46	332

External Links

No external refs found!