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Description : cyclic nucleotide-gated cation channel *(CNGC)
Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.C03656.1 | |
| Cluster | HCAA Clusters: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 266514 | No alias | cyclic nucleotide-gated channel 15 | 0.03 | Orthogroups_2024-Update | |
| 84488 | No alias | cyclic nucleotide-gated cation channel 4 | 0.02 | Orthogroups_2024-Update | |
| A4A49_17367 | No alias | cyclic nucleotide-gated ion channel 1 | 0.03 | Orthogroups_2024-Update | |
| A4A49_20339 | No alias | cyclic nucleotide-gated ion channel 4 | 0.04 | Orthogroups_2024-Update | |
| A4A49_22015 | No alias | putative cyclic nucleotide-gated ion channel 15 | 0.03 | Orthogroups_2024-Update | |
| A4A49_24346 | No alias | cyclic nucleotide-gated ion channel 2 | 0.03 | Orthogroups_2024-Update | |
| At1g19780 | No alias | Putative cyclic nucleotide-gated ion channel 8... | 0.04 | Orthogroups_2024-Update | |
| At5g53130 | No alias | Cyclic nucleotide-gated ion channel 1... | 0.06 | Orthogroups_2024-Update | |
| Brara.A02980.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G074317 | No alias | Cyclic nucleotide-regulated ion channel family protein | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G169788 | No alias | cyclic nucleotide gated channel 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.03G257000 | No alias | cyclic nucleotide gated channel 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G184000 | No alias | cyclic nucleotide-gated channel 16 | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G168700 | No alias | cyclic nucleotide-binding transporter 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G025300 | No alias | cyclic nucleotide gated channel 1 | 0.04 | Orthogroups_2024-Update | |
| HORVU1Hr1G065990.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G065950.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.04 | Orthogroups_2024-Update | |
| Potri.006G271050 | No alias | cyclic nucleotide-gated channel 14 | 0.02 | Orthogroups_2024-Update | |
| Potri.012G038700 | No alias | cyclic nucleotide-binding transporter 1 | 0.03 | Orthogroups_2024-Update | |
| Potri.017G089900 | No alias | Cyclic nucleotide-regulated ion channel family protein | 0.02 | Orthogroups_2024-Update | |
| Potri.018G009200 | No alias | cyclic nucleotide-gated channel 14 | 0.03 | Orthogroups_2024-Update | |
| Pp1s211_70V6 | No alias | T3B23.7; cyclic nucleotide-regulated ion channel,... | 0.04 | Orthogroups_2024-Update | |
| Seita.9G156700.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G155100.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.03 | Orthogroups_2024-Update | |
| Solyc05g050360 | No alias | cyclic nucleotide gated channel 1 (AHRD V3.3 *** AT5G53130.1) | 0.03 | Orthogroups_2024-Update | |
| Solyc09g007840 | No alias | Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00000851.5 | No alias | (at1g19780 : 119.0) member of Cyclic nucleotide gated... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005216 | ion channel activity | IEA | 16Dec |
| BP | GO:0006811 | ion transport | IEA | 16Dec |
| CC | GO:0016020 | membrane | IEA | 16Dec |
| BP | GO:0055085 | transmembrane transport | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004497 | monooxygenase activity | IEP | Predicted GO |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| MF | GO:0005506 | iron ion binding | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005821 | Ion_trans_dom | 210 | 517 |
| No external refs found! |