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  5. Brara.C03676.1

Brara.C03676.1


Description : EC_4.1 carbon-carbon lyase & phosphopantothenoylcysteine decarboxylase


Gene families : OG_42_0003409 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003409_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03676.1
Cluster HCAA Clusters: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
Potri.015G089600 No alias HAL3-like protein A 0.04 Orthogroups_2024-Update
Sobic.010G074500.1 No alias EC_4.1 carbon-carbon lyase & phosphopantothenoylcysteine... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003382 Flavoprotein 21 193
No external refs found!