Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.C03704.1 | |
Cluster | HCAA Clusters: Cluster_63 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
412609 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
A4A49_21361 | No alias | ring-h2 finger protein atl78 | 0.04 | Orthogroups_2024-Update | |
Bradi3g44733 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi5g11880 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.C03092.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
GRMZM2G340444 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G082030.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
MA_611616g0010 | No alias | (at1g49230 : 125.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_9515738g0010 | No alias | (at5g17600 : 145.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.005G071300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Solyc01g100100 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update | |
Sopen12g029870 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | Predicted GO |
MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0008037 | cell recognition | IEP | Predicted GO |
MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Predicted GO |
CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
BP | GO:0048544 | recognition of pollen | IEP | Predicted GO |
MF | GO:0050661 | NADP binding | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 131 | 174 |
No external refs found! |