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  5. Brara.C03708.1

Brara.C03708.1


Description : polyol/monosaccharide transporter *(PLT)


Gene families : OG_42_0000406 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03708.1
Cluster HCAA Clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
109547 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
96814 No alias polyol/monosaccharide transporter 5 0.02 Orthogroups_2024-Update
97702 No alias polyol/monosaccharide transporter 1 0.04 Orthogroups_2024-Update
Brara.K01303.1 No alias polyol/monosaccharide transporter *(PLT) 0.04 Orthogroups_2024-Update
GRMZM2G062156 No alias polyol/monosaccharide transporter 5 0.02 Orthogroups_2024-Update
PSME_00010842-RA No alias (at2g20780 : 530.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Seita.3G014500.1 No alias polyol/monosaccharide transporter *(PLT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
CC GO:0000444 MIS12/MIND type complex IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 45 504
No external refs found!