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  5. Brara.C03741.1

Brara.C03741.1


Description : phosphoglycerate dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG_42_0001120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03741.1
Cluster HCAA Clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G003400 No alias D-3-phosphoglycerate dehydrogenase 0.03 Orthogroups_2024-Update
Sobic.010G214100.1 No alias phosphoglycerate dehydrogenase & EC_1.1 oxidoreductase... 0.03 Orthogroups_2024-Update
Solyc10g049890 No alias D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *** K4D0E5_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA 16Dec
MF GO:0051287 NAD binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006139 D-isomer_2_OHA_DH_cat_dom 48 357
IPR006140 D-isomer_DH_NAD-bd 150 325
IPR002912 ACT_dom 515 575
No external refs found!