Brara.C03783.1

Description : subgroup ERF-VIII transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C03783.1
Cluster	HCAA Clusters: Cluster_312

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03202	No alias	ethylene-responsive transcription factor erf053	0.04	Orthogroups_2024-Update
A4A49_16759	No alias	ethylene-responsive transcription factor erf012	0.04	Orthogroups_2024-Update
A4A49_18156	No alias	ethylene-responsive transcription factor shine 3	0.03	Orthogroups_2024-Update
At1g53910	No alias	Ethylene-responsive transcription factor RAP2-12...	0.04	Orthogroups_2024-Update
At1g71130	No alias	Ethylene-responsive transcription factor ERF070...	0.03	Orthogroups_2024-Update
At3g15210	No alias	Ethylene-responsive transcription factor 4...	0.04	Orthogroups_2024-Update
At3g16770	No alias	Ethylene-responsive transcription factor RAP2-3...	0.04	Orthogroups_2024-Update
At4g16750	No alias	Ethylene-responsive transcription factor ERF039...	0.05	Orthogroups_2024-Update
At4g25480	No alias	Dehydration-responsive element-binding protein 1A...	0.03	Orthogroups_2024-Update
At5g05410	No alias	Dehydration-responsive element-binding protein 2A...	0.04	Orthogroups_2024-Update
At5g25390	No alias	SHN3 [Source:UniProtKB/TrEMBL;Acc:A0A178USD7]	0.03	Orthogroups_2024-Update
Brara.A00880.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.B00174.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.B02236.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
Brara.C00211.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
Brara.C00977.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.03	Orthogroups_2024-Update
Brara.D01564.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.I00528.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.J02216.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G174917	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
Glyma.05G063500	No alias	ethylene responsive element binding factor 5	0.03	Orthogroups_2024-Update
Glyma.05G214400	No alias	cytokinin response factor 2	0.03	Orthogroups_2024-Update
Glyma.07G025800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G044300	No alias	related to AP2 12	0.04	Orthogroups_2024-Update
Glyma.11G053600	No alias	DREB and EAR motif protein 2	0.05	Orthogroups_2024-Update
Glyma.12G110400	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os02g32140	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g46410	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g40150	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g39850	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g41060	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_28894g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Mp4g00380.1	No alias	no hits & (original description: none)	0.02	Orthogroups_2024-Update
Mp5g12480.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Orthogroups_2024-Update
PSME_00007285-RA	No alias	(at5g50080 : 84.0) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00022946-RA	No alias	(at5g61890 : 105.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00040934-RA	No alias	(at5g64750 : 100.0) Encodes a putative transcription...	0.02	Orthogroups_2024-Update
Potri.001G067600	No alias	related to AP2 6l	0.04	Orthogroups_2024-Update
Potri.001G110500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
Potri.003G220200	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.04	Orthogroups_2024-Update
Potri.010G072300	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Pp1s132_34V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s14_196V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Pp1s259_94V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s276_72V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s296_32V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s31_112V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s41_212V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Seita.1G330800.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.1G332600.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.2G269600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.4G041600.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Seita.4G092200.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Seita.5G115000.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Seita.7G232100.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G502300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G014800.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Sobic.010G071700.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.06	Orthogroups_2024-Update
Sobic.010G240900.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc04g051360	No alias	Ethylene Response Factor D.1	0.03	Orthogroups_2024-Update
Solyc04g078640	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.04	Orthogroups_2024-Update
Solyc12g009490	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Sopen02g022270	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen05g008450	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen08g004160	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0004061	arylformamidase activity	IEP	Predicted GO
MF	GO:0005048	signal sequence binding	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
BP	GO:0005986	sucrose biosynthetic process	IEP	Predicted GO
BP	GO:0006568	tryptophan metabolic process	IEP	Predicted GO
BP	GO:0006569	tryptophan catabolic process	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006586	indolalkylamine metabolic process	IEP	Predicted GO
BP	GO:0006621	protein retention in ER lumen	IEP	Predicted GO
BP	GO:0009063	cellular amino acid catabolic process	IEP	Predicted GO
BP	GO:0009074	aromatic amino acid family catabolic process	IEP	Predicted GO
BP	GO:0009310	amine catabolic process	IEP	Predicted GO
BP	GO:0016054	organic acid catabolic process	IEP	Predicted GO
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Predicted GO
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Predicted GO
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Predicted GO
BP	GO:0019441	tryptophan catabolic process to kynurenine	IEP	Predicted GO
CC	GO:0030118	clathrin coat	IEP	Predicted GO
CC	GO:0030125	clathrin vesicle coat	IEP	Predicted GO
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Predicted GO
CC	GO:0030132	clathrin coat of coated pit	IEP	Predicted GO
BP	GO:0032507	maintenance of protein location in cell	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
MF	GO:0033218	amide binding	IEP	Predicted GO
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Predicted GO
BP	GO:0042180	cellular ketone metabolic process	IEP	Predicted GO
MF	GO:0042277	peptide binding	IEP	Predicted GO
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	Predicted GO
BP	GO:0042430	indole-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042436	indole-containing compound catabolic process	IEP	Predicted GO
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
CC	GO:0044459	plasma membrane part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
BP	GO:0045185	maintenance of protein location	IEP	Predicted GO
BP	GO:0046218	indolalkylamine catabolic process	IEP	Predicted GO
BP	GO:0046395	carboxylic acid catabolic process	IEP	Predicted GO
MF	GO:0046923	ER retention sequence binding	IEP	Predicted GO
MF	GO:0050307	sucrose-phosphate phosphatase activity	IEP	Predicted GO
MF	GO:0050308	sugar-phosphatase activity	IEP	Predicted GO
BP	GO:0051235	maintenance of location	IEP	Predicted GO
BP	GO:0051651	maintenance of location in cell	IEP	Predicted GO
BP	GO:0070189	kynurenine metabolic process	IEP	Predicted GO
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Predicted GO
CC	GO:0098797	plasma membrane protein complex	IEP	Predicted GO
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	21	71

External Links

No external refs found!

Brara.C03783.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation