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  5. Brara.C03818.1

Brara.C03818.1


Description : BBX class-V transcription factor


Gene families : OG_42_0000803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000803_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03818.1
Cluster HCAA Clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
A4A49_12129 No alias hypothetical protein 0.04 Orthogroups_2024-Update
A4A49_19758 No alias b-box domain protein 30 0.04 Orthogroups_2024-Update
A4A49_22924 No alias b-box zinc finger protein 32 0.04 Orthogroups_2024-Update
A4A49_62883 No alias b-box domain protein 30 0.03 Orthogroups_2024-Update
At3g21890 No alias BBX31 [Source:UniProtKB/TrEMBL;Acc:A0A178VEW7] 0.07 Orthogroups_2024-Update
Brara.A02749.1 No alias BBX class-V transcription factor 0.03 Orthogroups_2024-Update
Brara.B01378.1 No alias BBX class-V transcription factor 0.03 Orthogroups_2024-Update
Brara.H01521.1 No alias BBX class-V transcription factor 0.03 Orthogroups_2024-Update
Brara.J00918.1 No alias BBX class-V transcription factor 0.04 Orthogroups_2024-Update
MA_10430891g0010 No alias (at4g27310 : 113.0) B-box type zinc finger family... 0.02 Orthogroups_2024-Update
Mp3g20050.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.001G414700 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.010G251800 No alias B-box 32 0.04 Orthogroups_2024-Update
Potri.011G125400 No alias B-box type zinc finger family protein 0.04 Orthogroups_2024-Update
Potri.013G150500 No alias B-box type zinc finger family protein 0.05 Orthogroups_2024-Update
Pp1s22_52V6 No alias F24B18.9; CONSTANS B-box zinc finger family protein... 0.04 Orthogroups_2024-Update
Pp1s364_14V6 No alias F24B18.9; CONSTANS B-box zinc finger family protein... 0.02 Orthogroups_2024-Update
Pp1s97_104V6 No alias zinc finger (b-box type) family protein 0.02 Orthogroups_2024-Update
Seita.6G043200.1 No alias BBX class-V transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G217532.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g063280 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc07g053140 No alias Zinc finger, B-box (AHRD V3.3 *** A0A103Y7X2_CYNCS) 0.02 Orthogroups_2024-Update
Solyc10g006750 No alias ABC-2 and Plant PDR ABC-type transporter family protein... 0.05 Orthogroups_2024-Update
Solyc12g005660 No alias Zinc finger, B-box (AHRD V3.3 *-* A0A103Y7X2_CYNCS) 0.03 Orthogroups_2024-Update
Sopen12g001590 No alias B-box zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!