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  5. Brara.C03823.1

Brara.C03823.1


Description : p-coumarate


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03823.1
Cluster HCAA Clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
At1g20490 No alias AMP-dependent synthetase and ligase family protein... 0.03 Orthogroups_2024-Update
At1g20510 No alias 4-coumarate--CoA ligase-like 5... 0.04 Orthogroups_2024-Update
GRMZM2G075333 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
GRMZM2G122787 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Glyma.06G171900 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Glyma.14G223200 No alias OPC-8:0 CoA ligase1 0.04 Orthogroups_2024-Update
HORVU0Hr1G002720.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G089000.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G081940.3 No alias OPC-8 0.02 Orthogroups_2024-Update
MA_10432138g0010 No alias (at1g20510 : 477.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00013809-RA No alias (at1g20510 : 678.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
Potri.012G095000 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Pp1s12_59V6 No alias amp dependent 0.05 Orthogroups_2024-Update
Pp1s71_170V6 No alias 4-coumarate: ligase 0.03 Orthogroups_2024-Update
Seita.6G167900.1 No alias p-coumarate 0.04 Orthogroups_2024-Update
Sobic.010G214900.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Sopen03g030320 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update
Sopen12g031420 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 66 472
IPR025110 AMP-bd_C 481 556
No external refs found!