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  5. Brara.C03862.1

Brara.C03862.1


Description : Unknown function


Gene families : OG_42_0000276 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03862.1
Cluster HCAA Clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
423607 No alias IQ-domain 2 0.02 Orthogroups_2024-Update
A4A49_14249 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi1g13650 No alias IQ-domain 5 0.03 Orthogroups_2024-Update
Bradi1g49070 No alias IQ-domain 9 0.01 Orthogroups_2024-Update
Brara.A03166.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.D02069.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.17G185200 No alias IQ-domain 2 0.05 Orthogroups_2024-Update
Glyma.20G177900 No alias IQ-domain 2 0.03 Orthogroups_2024-Update
HORVU1Hr1G013210.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G024060.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g57330 No alias IQ calmodulin-binding motif domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g03190 No alias IQ calmodulin-binding motif domain containing protein, expressed 0.02 Orthogroups_2024-Update
Mp5g20460.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.001G375700 No alias IQ-domain 10 0.04 Orthogroups_2024-Update
Potri.011G096500 No alias IQ-domain 10 0.05 Orthogroups_2024-Update
Pp1s382_30V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s6_468V6 No alias T1D16.18; calmodulin-binding family protein [Arabidopsis... 0.02 Orthogroups_2024-Update
Sobic.003G032200.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g050050 No alias SUN-like protein 13 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 86 104
IPR000048 IQ_motif_EF-hand-BS 110 124
No external refs found!