1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C03863.1

Brara.C03863.1


Description : Unknown function


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03863.1
Cluster HCAA Clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
At1g45616 No alias Receptor-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C637] 0.03 Orthogroups_2024-Update
Brara.A02063.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.02G271200 No alias receptor like protein 27 0.03 Orthogroups_2024-Update
Glyma.09G145600 No alias receptor like protein 7 0.04 Orthogroups_2024-Update
Glyma.14G106400 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
LOC_Os01g06730 No alias verticillium wilt disease resistance protein, putative, expressed 0.04 Orthogroups_2024-Update
Potri.001G437700 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Potri.011G021332 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Potri.011G054500 No alias receptor like protein 6 0.05 Orthogroups_2024-Update
Potri.011G055200 No alias receptor like protein 53 0.04 Orthogroups_2024-Update
Potri.012G009200 No alias receptor like protein 33 0.04 Orthogroups_2024-Update
Potri.012G020600 No alias receptor like protein 12 0.03 Orthogroups_2024-Update
Potri.T160800 No alias receptor like protein 43 0.03 Orthogroups_2024-Update
Potri.T164100 No alias receptor like protein 12 0.05 Orthogroups_2024-Update
Seita.7G139100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g016370 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Solyc10g076500 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g001720 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update
Sopen01g003910 No alias Leucine rich repeat 0.02 Orthogroups_2024-Update
Sopen01g008060 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update
Sopen03g006290 No alias Leucine Rich Repeat 0.02 Orthogroups_2024-Update
Sopen10g028140 No alias Leucine rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 31 90
IPR001611 Leu-rich_rpt 431 491
IPR001611 Leu-rich_rpt 405 427
No external refs found!