Brara.C03890.1

Description : HSF-type transcription factor

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C03890.1
Cluster	HCAA Clusters: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
A4A49_05282	No alias	heat stress transcription factor a-8	0.03	Orthogroups_2024-Update
At5g16820	No alias	Heat stress transcription factor A-1b...	0.02	Orthogroups_2024-Update
Bradi1g38140	No alias	heat shock transcription factor C1	0.03	Orthogroups_2024-Update
Brara.I01903.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.J01849.1	No alias	transcriptional regulator *(HsfA1) & HSF-type...	0.05	Orthogroups_2024-Update
Brara.K01279.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G115456	No alias	heat shock factor 3	0.03	Orthogroups_2024-Update
Glyma.07G235600	No alias	heat shock transcription factor B4	0.03	Orthogroups_2024-Update
Glyma.08G119900	No alias	heat shock transcription factor A4A	0.02	Orthogroups_2024-Update
Glyma.10G029600	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
Glyma.11G025700	No alias	winged-helix DNA-binding transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.11G056200	No alias	heat shock factor 4	0.03	Orthogroups_2024-Update
Glyma.16G196200	No alias	heat shock transcription factor B2A	0.03	Orthogroups_2024-Update
Glyma.17G174900	No alias	heat shock factor 4	0.03	Orthogroups_2024-Update
HORVU7Hr1G056820.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g53220	No alias	HSF-type DNA-binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g28354	No alias	CPuORF39 - conserved peptide uORF-containing transcript,...	0.04	Orthogroups_2024-Update
MA_41252g0020	No alias	(at1g32330 : 219.0) Member of Heat Stress Transcription...	0.03	Orthogroups_2024-Update
PSME_00001672-RA	No alias	(at4g36990 : 204.0) encodes a protein whose sequence is...	0.03	Orthogroups_2024-Update
PSME_00053293-RA	No alias	(at1g46264 : 155.0) Encodes SCHIZORIZA, a member of Heat...	0.03	Orthogroups_2024-Update
PSME_00053758-RA	No alias	(at5g62020 : 205.0) member of Heat Stress Transcription...	0.04	Orthogroups_2024-Update
Potri.011G071700	No alias	heat shock transcription factor A4A	0.04	Orthogroups_2024-Update
Pp1s84_95V6	No alias	heat shock transcription factor 1	0.03	Orthogroups_2024-Update
Seita.1G025800.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Seita.2G282400.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Seita.4G237900.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G318300.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G531900.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc07g040680	No alias	SolycHsfA9	0.05	Orthogroups_2024-Update
Sopen07g029070	No alias	HSF-type DNA-binding	0.02	Orthogroups_2024-Update
Sopen08g018510	No alias	HSF-type DNA-binding	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0004556	alpha-amylase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0005984	disaccharide metabolic process	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predicted GO
BP	GO:0009314	response to radiation	IEP	Predicted GO
BP	GO:0009416	response to light stimulus	IEP	Predicted GO
BP	GO:0009581	detection of external stimulus	IEP	Predicted GO
BP	GO:0009582	detection of abiotic stimulus	IEP	Predicted GO
BP	GO:0009583	detection of light stimulus	IEP	Predicted GO
BP	GO:0009584	detection of visible light	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0051606	detection of stimulus	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	61	150

External Links

No external refs found!

Brara.C03890.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation