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  5. Brara.C03895.1

Brara.C03895.1


Description : calcium sensor *(CML)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03895.1
Cluster HCAA Clusters: Cluster_404

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G224300 No alias calmodulin 8 0.03 Orthogroups_2024-Update
LOC_Os03g53200 No alias OsCML4 - Calmodulin-related calcium sensor protein, expressed 0.02 Orthogroups_2024-Update
Potri.008G159300 No alias calmodulin-like 11 0.03 Orthogroups_2024-Update
Seita.3G380800.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
Seita.9G097000.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Sobic.003G330300.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
Sopen11g029910 No alias EF hand 0.02 Orthogroups_2024-Update
evm.model.tig00021070.12 No alias (p04352|calm_chlre : 110.0) Calmodulin (CaM) -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 12 73
IPR002048 EF_hand_dom 84 146
No external refs found!