Brara.C03963.1

Description : HSF-type transcription factor

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C03963.1
Cluster	HCAA Clusters: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
A4A49_40866	No alias	heat stress transcription factor b-2b	0.04	Orthogroups_2024-Update
At4g36990	No alias	Heat stress transcription factor B-1...	0.03	Orthogroups_2024-Update
Bradi2g48990	No alias	heat shock transcription factor C1	0.02	Orthogroups_2024-Update
Cre07.g354500	No alias	heat shock transcription factor A1D	0.01	Orthogroups_2024-Update
Cre09.g387150	No alias	heat shock transcription factor A1D	0.02	Orthogroups_2024-Update
GRMZM2G098696	No alias	heat shock transcription factor B2A	0.02	Orthogroups_2024-Update
Glyma.07G086400	No alias	heat shock transcription factor C1	0.02	Orthogroups_2024-Update
Glyma.07G235600	No alias	heat shock transcription factor B4	0.03	Orthogroups_2024-Update
Glyma.11G056200	No alias	heat shock factor 4	0.03	Orthogroups_2024-Update
Glyma.14G036200	No alias	heat shock transcription factor B4	0.02	Orthogroups_2024-Update
Glyma.16G196200	No alias	heat shock transcription factor B2A	0.02	Orthogroups_2024-Update
HORVU3Hr1G069590.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G056820.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os03g06630	No alias	heat stress transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g25120	No alias	HSF-type DNA-binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_29913g0010	No alias	(at3g22830 : 255.0) member of Heat Stress Transcription...	0.03	Orthogroups_2024-Update
PSME_00034736-RA	No alias	(at1g46264 : 92.4) Encodes SCHIZORIZA, a member of Heat...	0.02	Orthogroups_2024-Update
PSME_00053293-RA	No alias	(at1g46264 : 155.0) Encodes SCHIZORIZA, a member of Heat...	0.02	Orthogroups_2024-Update
Seita.5G318300.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G225300.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc07g040680	No alias	SolycHsfA9	0.03	Orthogroups_2024-Update
Sopen07g019390	No alias	HSF-type DNA-binding	0.03	Orthogroups_2024-Update
Sopen07g029070	No alias	HSF-type DNA-binding	0.02	Orthogroups_2024-Update
evm.model.contig_435.5	No alias	(at5g16820 : 143.0) Encodes a putative transcription...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003714	transcription corepressor activity	IEP	Predicted GO
MF	GO:0004143	diacylglycerol kinase activity	IEP	Predicted GO
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	Predicted GO
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Predicted GO
MF	GO:0047952	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity	IEP	Predicted GO
BP	GO:0052646	alditol phosphate metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	19	108

External Links

No external refs found!

Brara.C03963.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation