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  5. Brara.C03996.1

Brara.C03996.1


Description : Unknown function


Gene families : OG_42_0000379 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03996.1
Cluster HCAA Clusters: Cluster_399

Target Alias Description ECC score Gene Family Method Actions
At1g67450 No alias Putative F-box protein At1g67450... 0.04 Orthogroups_2024-Update
At2g18780 No alias F-box protein At2g18780 [Source:UniProtKB/Swiss-Prot;Acc:Q84V15] 0.03 Orthogroups_2024-Update
At3g04250 No alias F-box associated ubiquitination effector family protein... 0.04 Orthogroups_2024-Update
At3g13820 No alias F-box protein At3g13820 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRW6] 0.06 Orthogroups_2024-Update
At3g16740 No alias F-box/kelch-repeat protein At3g16740... 0.03 Orthogroups_2024-Update
At3g20700 No alias F-box associated ubiquitination effector family protein... 0.04 Orthogroups_2024-Update
At3g21170 No alias Putative F-box protein At3g21170... 0.04 Orthogroups_2024-Update
At3g22350 No alias F-box and associated interaction domains-containing... 0.03 Orthogroups_2024-Update
At3g22870 No alias Putative F-box/kelch-repeat protein At3g22870... 0.06 Orthogroups_2024-Update
At3g49520 No alias Putative F-box protein At3g49520... 0.03 Orthogroups_2024-Update
Brara.A00991.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C03646.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.D02210.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G02249.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 4 43
IPR006527 F-box-assoc_dom_typ1 190 347
No external refs found!