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  5. Brara.C04077.1

Brara.C04077.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000830 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000830_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C04077.1
Cluster HCAA Clusters: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
93898 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Bradi5g27650 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Pp1s112_116V6 No alias white-brown-complex abc transporter family 0.03 Orthogroups_2024-Update
Pp1s306_80V6 No alias white-brown-complex abc transporter family 0.02 Orthogroups_2024-Update
Seita.3G000700.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc03g113690 No alias Abc transporter family protein (AHRD V3.3 *** D7LZ77_ARALL) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 56 204
IPR013525 ABC_2_trans 356 564
No external refs found!