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  5. Brara.C04106.1

Brara.C04106.1


Description : Unknown function


Gene families : OG_42_0000608 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000608_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C04106.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
At2g42720 No alias F-box/LRR-repeat protein At2g42720... 0.03 Orthogroups_2024-Update
At3g42770 No alias Putative F-box/LRR-repeat protein At3g42770... 0.03 Orthogroups_2024-Update
At3g44080 No alias Putative F-box/LRR-repeat protein At3g44080... 0.04 Orthogroups_2024-Update
At3g49150 No alias F-box/RNI-like superfamily protein [Source:TAIR;Acc:AT3G49150] 0.04 Orthogroups_2024-Update
At3g58860 No alias Putative F-box protein At3g58860... 0.04 Orthogroups_2024-Update
At3g58890 No alias RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LXR3] 0.03 Orthogroups_2024-Update
At3g62440 No alias SAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA18] 0.03 Orthogroups_2024-Update
At4g13960 No alias F-box/RNI-like superfamily protein [Source:TAIR;Acc:AT4G13960] 0.03 Orthogroups_2024-Update
At5g25860 No alias Putative F-box/LRR-repeat protein At5g25860... 0.03 Orthogroups_2024-Update
Brara.D01340.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D01779.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.E01327.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G01823.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00020.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I04139.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I04823.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K01008.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G344300.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 15 49
No external refs found!