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Description : chaperone of protochlorophyllide oxidoreductase *(CPP1)
Gene families : OG_42_0002225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002225_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.C04198.1 | |
| Cluster | HCAA Clusters: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g35900 | No alias | Protein of unknown function (DUF3353) | 0.02 | Orthogroups_2024-Update | |
| LOC_Os09g21250 | No alias | expressed protein | 0.03 | Orthogroups_2024-Update | |
| Potri.007G015600 | No alias | Protein of unknown function (DUF3353) | 0.03 | Orthogroups_2024-Update | |
| Seita.2G193700.1 | No alias | chaperone of protochlorophyllide oxidoreductase *(CPP1) | 0.03 | Orthogroups_2024-Update | |
| Seita.6G145400.1 | No alias | chaperone of protochlorophyllide oxidoreductase *(CPP1) | 0.05 | Orthogroups_2024-Update | |
| Sobic.007G126900.1 | No alias | chaperone of protochlorophyllide oxidoreductase *(CPP1) | 0.02 | Orthogroups_2024-Update | |
| Solyc03g114470 | No alias | Cell growth defect factor-like (AHRD V3.3 *** Q307Y4_SOLTU) | 0.04 | Orthogroups_2024-Update | |
| evm.model.tig00001154.33 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0004366 | glycerol-3-phosphate O-acyltransferase activity | IEP | Predicted GO |
| MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016874 | ligase activity | IEP | Predicted GO |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| MF | GO:2001070 | starch binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021788 | CPP1-like | 79 | 257 |
| No external refs found! |