Brara.C04204.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C04204.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.06 Orthogroups_2024-Update
A4A49_13356 No alias cyclic dof factor 3 0.04 Orthogroups_2024-Update
At1g26790 No alias Dof-type zinc finger DNA-binding family protein... 0.03 Orthogroups_2024-Update
At1g69570 No alias Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] 0.03 Orthogroups_2024-Update
At3g47500 No alias Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3] 0.05 Orthogroups_2024-Update
At5g39660 No alias Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5] 0.05 Orthogroups_2024-Update
At5g62430 No alias Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3] 0.04 Orthogroups_2024-Update
Bradi1g17410 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Brara.D00980.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.G02475.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.H02152.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Glyma.18G260500 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
HORVU2Hr1G017290.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
HORVU2Hr1G095390.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G065250.4 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
LOC_Os01g15900 No alias expressed protein 0.02 Orthogroups_2024-Update
PSME_00004776-RA No alias (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... 0.04 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Potri.008G087800 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
Pp1s124_139V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s12_364V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.6G192200.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.001G034300.3 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.003G121400.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.006G182300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.05 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.03 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.05 Orthogroups_2024-Update
Sopen06g027050 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 50 106
No external refs found!