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Description : transcription factor *(DOF)
Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.C04204.1 | |
| Cluster | HCAA Clusters: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 29563 | No alias | OBF binding protein 4 | 0.06 | Orthogroups_2024-Update | |
| A4A49_13356 | No alias | cyclic dof factor 3 | 0.04 | Orthogroups_2024-Update | |
| At1g26790 | No alias | Dof-type zinc finger DNA-binding family protein... | 0.03 | Orthogroups_2024-Update | |
| At1g69570 | No alias | Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] | 0.03 | Orthogroups_2024-Update | |
| At3g47500 | No alias | Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3] | 0.05 | Orthogroups_2024-Update | |
| At5g39660 | No alias | Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5] | 0.05 | Orthogroups_2024-Update | |
| At5g62430 | No alias | Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3] | 0.04 | Orthogroups_2024-Update | |
| Bradi1g17410 | No alias | cycling DOF factor 3 | 0.02 | Orthogroups_2024-Update | |
| Brara.D00980.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
| Brara.F01753.1 | No alias | transcription factor *(DOF) | 0.04 | Orthogroups_2024-Update | |
| Brara.G02475.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
| Brara.H02152.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G260500 | No alias | cycling DOF factor 2 | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G017290.1 | No alias | transcription factor *(DOF) | 0.04 | Orthogroups_2024-Update | |
| HORVU2Hr1G095390.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G065250.4 | No alias | transcription factor *(DOF) | 0.05 | Orthogroups_2024-Update | |
| LOC_Os01g15900 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
| PSME_00004776-RA | No alias | (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... | 0.04 | Orthogroups_2024-Update | |
| PSME_00028077-RA | No alias | (at5g39660 : 211.0) Dof-type zinc finger... | 0.03 | Orthogroups_2024-Update | |
| Potri.004G121800 | No alias | cycling DOF factor 2 | 0.02 | Orthogroups_2024-Update | |
| Potri.008G087800 | No alias | cycling DOF factor 2 | 0.04 | Orthogroups_2024-Update | |
| Pp1s124_139V6 | No alias | zinc finger | 0.03 | Orthogroups_2024-Update | |
| Pp1s12_364V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
| Seita.5G052700.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
| Seita.6G192200.1 | No alias | transcription factor *(DOF) | 0.04 | Orthogroups_2024-Update | |
| Sobic.001G034300.3 | No alias | transcription factor *(DOF) | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G121400.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
| Sobic.006G182300.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G014400.1 | No alias | transcription factor *(DOF) | 0.02 | Orthogroups_2024-Update | |
| Solyc02g067230 | No alias | Dof zinc finger protein3 | 0.05 | Orthogroups_2024-Update | |
| Solyc02g088070 | No alias | Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) | 0.03 | Orthogroups_2024-Update | |
| Solyc05g007880 | No alias | Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) | 0.05 | Orthogroups_2024-Update | |
| Sopen06g027050 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | 16Dec |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | Predicted GO |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Predicted GO |
| MF | GO:0005253 | anion channel activity | IEP | Predicted GO |
| MF | GO:0005254 | chloride channel activity | IEP | Predicted GO |
| BP | GO:0006821 | chloride transport | IEP | Predicted GO |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Predicted GO |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Predicted GO |
| CC | GO:0009522 | photosystem I | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015267 | channel activity | IEP | Predicted GO |
| BP | GO:0015698 | inorganic anion transport | IEP | Predicted GO |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003851 | Znf_Dof | 50 | 106 |
| No external refs found! |