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  5. Brara.C04252.1

Brara.C04252.1


Description : circadian clock evening oscillator component *(TOC1) of circadian clock


Gene families : OG_42_0004519 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C04252.1
Cluster HCAA Clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
98165 No alias pseudo-response regulator 7 0.02 Orthogroups_2024-Update
A4A49_15373 No alias two-component response regulator-like aprr1 0.08 Orthogroups_2024-Update
At5g61380 No alias Two-component response regulator-like APRR1... 0.04 Orthogroups_2024-Update
Bradi3g48880 No alias CCT motif -containing response regulator protein 0.02 Orthogroups_2024-Update
GRMZM2G020081 No alias CCT motif -containing response regulator protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G057630.1 No alias circadian clock evening oscillator component *(TOC1) of... 0.03 Orthogroups_2024-Update
LOC_Os02g40510 No alias response regulator receiver domain containing protein, expressed 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 23 134
IPR010402 CCT_domain 490 532
No external refs found!