Brara.C04260.1

Description : component *(SMC6) of homologous recombination repair Smc5-Smc6 complex

Gene families : OG_42_0004684 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004684_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C04260.1
Cluster	HCAA Clusters: Cluster_220

Target	Alias	Description	ECC score	Gene Family Method	Actions
Kfl00608_0090	kfl00608_0090_v1.1	(at5g61460 : 571.0) Encodes SMC6B (STRUCTURAL...	0.02	Orthogroups_2024-Update
Seita.2G146100.1	No alias	component *(SMC6) of homologous recombination repair...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003697	single-stranded DNA binding	IEP	Predicted GO
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
CC	GO:0030684	preribosome	IEP	Predicted GO
CC	GO:0032040	small-subunit processome	IEP	Predicted GO
MF	GO:0042393	histone binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003395	RecF/RecN/SMC_N	22	1047

External Links

No external refs found!