Brara.C04275.1

Description : subgroup ERF-IX transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C04275.1
Cluster	HCAA Clusters: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
A4A49_11348	No alias	ethylene-responsive transcription factor erf010	0.03	Orthogroups_2024-Update
A4A49_13998	No alias	ethylene-responsive transcription factor 4	0.03	Orthogroups_2024-Update
A4A49_15089	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_36078	No alias	ethylene-responsive transcription factor 5	0.03	Orthogroups_2024-Update
A4A49_36835	No alias	ethylene-responsive transcription factor 5	0.04	Orthogroups_2024-Update
At2g35700	No alias	ERF38 [Source:UniProtKB/TrEMBL;Acc:A0A178VWJ3]	0.04	Orthogroups_2024-Update
At4g25470	No alias	C-repeat binding factor 2 [Source:UniProtKB/TrEMBL;Acc:B2BIW9]	0.04	Orthogroups_2024-Update
At5g07580	No alias	Ethylene-responsive transcription factor ERF106...	0.03	Orthogroups_2024-Update
At5g13330	No alias	Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]	0.03	Orthogroups_2024-Update
At5g25190	No alias	Ethylene-responsive transcription factor ERF003...	0.03	Orthogroups_2024-Update
Bradi1g38110	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi1g54450	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Bradi2g60331	No alias	C-repeat/DRE binding factor 1	0.03	Orthogroups_2024-Update
Bradi5g08380	No alias	related to AP2 6l	0.02	Orthogroups_2024-Update
Brara.B03207.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.C01524.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.03	Orthogroups_2024-Update
Brara.C03562.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.E02695.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.04	Orthogroups_2024-Update
Brara.F03559.1	No alias	subgroup ERF-IX transcription factor	0.05	Orthogroups_2024-Update
Brara.G00520.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.H01496.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.I03370.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.I04678.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G003466	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G085678	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G124011	No alias	dehydration response element B1A	0.03	Orthogroups_2024-Update
GRMZM2G138396	No alias	redox responsive transcription factor 1	0.03	Orthogroups_2024-Update
GRMZM2G481668	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.02G261700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.04G062900	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.04G084000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G236500	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Glyma.16G046300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G091600	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Glyma.20G195900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
HORVU2Hr1G103660.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU4Hr1G077360.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os02g43790	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g41780	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g07030	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_5629699g0010	No alias	(at5g21960 : 89.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_5805979g0010	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_69434g0020	No alias	(q40479\|erf2_tobac : 84.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_78784g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_9905g0010	No alias	(at4g17500 : 100.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00004812-RA	No alias	(at4g23750 : 92.4) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00022946-RA	No alias	(at5g61890 : 105.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00042940-RA	No alias	(at1g53910 : 121.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
Potri.001G154200	No alias	ethylene responsive element binding factor 5	0.03	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.04	Orthogroups_2024-Update
Potri.003G139300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G080300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.04	Orthogroups_2024-Update
Potri.010G183700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.016G126100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.04	Orthogroups_2024-Update
Pp1s127_75V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s21_247V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s81_44V6	No alias	dre-binding protein 2	0.03	Orthogroups_2024-Update
Seita.1G259000.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.2G269600.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Seita.6G023700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.7G232100.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G171300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.006G210300.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G077200.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.007G077300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.009G184400.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Solyc07g064890	No alias	Ethylene Response Factor F.2	0.03	Orthogroups_2024-Update
Solyc08g080290	No alias	Dehydration responsive element binding transcription...	0.03	Orthogroups_2024-Update
Sopen03g039660	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen06g022520	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen08g030250	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen09g032860	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004096	catalase activity	IEP	Predicted GO
BP	GO:0009314	response to radiation	IEP	Predicted GO
BP	GO:0009416	response to light stimulus	IEP	Predicted GO
BP	GO:0009581	detection of external stimulus	IEP	Predicted GO
BP	GO:0009582	detection of abiotic stimulus	IEP	Predicted GO
BP	GO:0009583	detection of light stimulus	IEP	Predicted GO
BP	GO:0009584	detection of visible light	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0051606	detection of stimulus	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	99	149

External Links

No external refs found!

Brara.C04275.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation