1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C04309.1

Brara.C04309.1


Description : Unknown function


Gene families : OG_42_0000095 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C04309.1
Cluster HCAA Clusters: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
At5g22540 No alias At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85] 0.03 Orthogroups_2024-Update
Bradi3g41570 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Bradi4g16901 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Glyma.02G271000 No alias Plant protein of unknown function (DUF247) 0.04 Orthogroups_2024-Update
Glyma.03G063400 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Glyma.16G161200 No alias Function unknown 0.02 Orthogroups_2024-Update
LOC_Os05g15230 No alias plant protein of unknown function domain containing... 0.03 Orthogroups_2024-Update
LOC_Os11g34090 No alias plant protein of unknown function domain containing... 0.03 Orthogroups_2024-Update
Potri.001G071200 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.013G146300 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.016G039700 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.016G039800 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.016G040000 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.016G040100 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.T114800 No alias Plant protein of unknown function (DUF247) 0.04 Orthogroups_2024-Update
Sopen01g021850 No alias Plant protein of unknown function 0.03 Orthogroups_2024-Update
Sopen05g002640 No alias Plant protein of unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004158 DUF247_pln 105 514
No external refs found!