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  5. Brara.C04403.1

Brara.C04403.1


Description : 3-ketoacyl-CoA synthase *(KCS)


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C04403.1
Cluster HCAA Clusters: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
A4A49_06835 No alias 3-ketoacyl-coa synthase 6 0.03 Orthogroups_2024-Update
A4A49_08035 No alias 3-ketoacyl-coa synthase 20 0.04 Orthogroups_2024-Update
A4A49_29650 No alias 3-ketoacyl-coa synthase 10 0.03 Orthogroups_2024-Update
Bradi3g20850 No alias 3-ketoacyl-CoA synthase 1 0.03 Orthogroups_2024-Update
Brara.H01198.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
Brara.J00238.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
GRMZM2G032095 No alias 3-ketoacyl-CoA synthase 17 0.03 Orthogroups_2024-Update
GRMZM2G137694 No alias 3-ketoacyl-CoA synthase 11 0.02 Orthogroups_2024-Update
Glyma.14G074300 No alias 3-ketoacyl-CoA synthase 4 0.03 Orthogroups_2024-Update
HORVU4Hr1G063420.2 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
HORVU6Hr1G036950.4 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
HORVU7Hr1G006910.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
LOC_Os01g34560 No alias 3-ketoacyl-CoA synthase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g08360 No alias 3-ketoacyl-CoA synthase 10, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g39750 No alias 3-ketoacyl-CoA synthase, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os11g37900 No alias 3-ketoacyl-CoA synthase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00008960-RA No alias (at2g26640 : 707.0) Encodes KCS11, a member of the... 0.03 Orthogroups_2024-Update
Potri.004G155600 No alias 3-ketoacyl-CoA synthase 4 0.04 Orthogroups_2024-Update
Potri.014G104300 No alias 3-ketoacyl-CoA synthase 1 0.03 Orthogroups_2024-Update
Pp1s28_28V6 No alias beta-ketoacyl-coa synthase family protein 0.02 Orthogroups_2024-Update
Pp1s30_335V6 No alias beta-ketoacyl-coa synthase family protein 0.03 Orthogroups_2024-Update
Pp1s8_88V6 No alias beta-ketoacyl- synthase 0.03 Orthogroups_2024-Update
Sobic.001G438100.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
Sobic.001G453200.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
Sobic.003G178500.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update
Sobic.004G086800.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
Sobic.005G168700.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
Solyc06g053900 No alias 3-ketoacyl-CoA synthase (AHRD V3.3 *** K4C677_SOLLC) 0.02 Orthogroups_2024-Update
Solyc09g065780 No alias 3-ketoacyl-CoA synthase (AHRD V3.3 *** K4CUK4_SOLLC) 0.03 Orthogroups_2024-Update
Sopen05g005020 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0009922 fatty acid elongase activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 92 354
IPR013747 ACP_syn_III_C 362 441
No external refs found!