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Description : autophagosome ubiquitin-fold protein *(ATG8)
Gene families : OG_42_0000932 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000932_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.C04506.1 | |
| Cluster | HCAA Clusters: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g14980 | No alias | Ubiquitin-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.G01770.1 | No alias | autophagosome ubiquitin-fold protein *(ATG8) | 0.02 | Orthogroups_2024-Update | |
| Mp1g21590.1 | No alias | ATG8 autophagosome ubiquitin-fold protein | 0.02 | Orthogroups_2024-Update | |
| Seita.7G243500.1 | No alias | autophagosome ubiquitin-fold protein *(ATG8) | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G315900.1 | No alias | autophagosome ubiquitin-fold protein *(ATG8) | 0.03 | Orthogroups_2024-Update | |
| Sobic.007G068900.1 | No alias | autophagosome ubiquitin-fold protein *(ATG8) | 0.04 | Orthogroups_2024-Update | |
| Solyc08g007400 | No alias | Autophagy-related protein (AHRD V3.3 *-* K4CIM7_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Solyc08g078820 | No alias | Autophagy-related protein (AHRD V3.3 *** K4CNP1_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Sopen08g027280 | No alias | Autophagy protein Atg8 ubiquitin like | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000976 | transcription regulatory region sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0000977 | RNA polymerase II regulatory region sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0001012 | RNA polymerase II regulatory region DNA binding | IEP | Predicted GO |
| MF | GO:0001067 | regulatory region nucleic acid binding | IEP | Predicted GO |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Predicted GO |
| MF | GO:0004506 | squalene monooxygenase activity | IEP | Predicted GO |
| MF | GO:0004806 | triglyceride lipase activity | IEP | Predicted GO |
| CC | GO:0005778 | peroxisomal membrane | IEP | Predicted GO |
| MF | GO:0016298 | lipase activity | IEP | Predicted GO |
| BP | GO:0016559 | peroxisome fission | IEP | Predicted GO |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Predicted GO |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
| BP | GO:0019915 | lipid storage | IEP | Predicted GO |
| CC | GO:0031903 | microbody membrane | IEP | Predicted GO |
| MF | GO:0032422 | purine-rich negative regulatory element binding | IEP | Predicted GO |
| CC | GO:0042579 | microbody | IEP | Predicted GO |
| MF | GO:0044212 | transcription regulatory region DNA binding | IEP | Predicted GO |
| CC | GO:0044438 | microbody part | IEP | Predicted GO |
| CC | GO:0044439 | peroxisomal part | IEP | Predicted GO |
| BP | GO:0048285 | organelle fission | IEP | Predicted GO |
| BP | GO:0051235 | maintenance of location | IEP | Predicted GO |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predicted GO |
| MF | GO:2001070 | starch binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004241 | Atg8-like | 14 | 117 |
| No external refs found! |