Brara.C04524.1

Description : component *(eL15) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0002052 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002052_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C04524.1
Cluster	HCAA Clusters: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
270259	No alias	Ribosomal protein L23/L15e family protein	0.14	Orthogroups_2024-Update
A4A49_58101	No alias	60s ribosomal protein l15-1	0.1	Orthogroups_2024-Update
At4g16720	No alias	Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:A0A178V5T1]	0.09	Orthogroups_2024-Update
Bradi1g27332	No alias	Ribosomal protein L23/L15e family protein	0.12	Orthogroups_2024-Update
Bradi3g23072	No alias	Ribosomal protein L23/L15e family protein	0.09	Orthogroups_2024-Update
Brara.C04547.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Brara.H00923.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.16	Orthogroups_2024-Update
Cre02.g091100	No alias	Ribosomal protein L23/L15e family protein	0.15	Orthogroups_2024-Update
GRMZM2G024354	No alias	Ribosomal protein L23/L15e family protein	0.06	Orthogroups_2024-Update
Glyma.01G207700	No alias	Ribosomal protein L23/L15e family protein	0.07	Orthogroups_2024-Update
Glyma.05G061400	No alias	Ribosomal protein L23/L15e family protein	0.13	Orthogroups_2024-Update
Glyma.11G034700	No alias	Ribosomal protein L23/L15e family protein	0.11	Orthogroups_2024-Update
Glyma.17G143200	No alias	Ribosomal protein L23/L15e family protein	0.12	Orthogroups_2024-Update
HORVU2Hr1G052650.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.1	Orthogroups_2024-Update
HORVU5Hr1G048830.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Kfl00064_0230	kfl00064_0230_v1.1	(at4g16720 : 296.0) Ribosomal protein L23/L15e family...	0.04	Orthogroups_2024-Update
LOC_Os03g40180	No alias	60S ribosomal protein L15, putative, expressed	0.06	Orthogroups_2024-Update
LOC_Os05g19370	No alias	60S ribosomal protein L15, putative, expressed	0.02	Orthogroups_2024-Update
MA_19619g0010	No alias	(o82528\|rl15_pethy : 332.0) 60S ribosomal protein L15 -...	0.08	Orthogroups_2024-Update
Mp1g06500.1	No alias	component RPL15 of LSU proteome component	0.12	Orthogroups_2024-Update
PSME_00006747-RA	No alias	(o82528\|rl15_pethy : 315.0) 60S ribosomal protein L15 -...	0.03	Orthogroups_2024-Update
Potri.003G078700	No alias	Ribosomal protein L23/L15e family protein	0.08	Orthogroups_2024-Update
Pp1s134_151V6	No alias	FCAALL.416; 60S ribosomal protein L15 (RPL15A)...	0.11	Orthogroups_2024-Update
Pp1s152_141V6	No alias	60S ribosomal protein L15-1 [Picea mariana]	0.1	Orthogroups_2024-Update
Pp1s28_15V6	No alias	60S ribosomal protein L15-1 [Picea mariana]	0.06	Orthogroups_2024-Update
Pp1s34_445V6	No alias	60S ribosomal protein L15-1 [Picea mariana]	0.08	Orthogroups_2024-Update
Pp1s7_364V6	No alias	FCAALL.416; 60S ribosomal protein L15 (RPL15A)...	0.05	Orthogroups_2024-Update
Seita.2G046800.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.21	Orthogroups_2024-Update
Seita.2G317300.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.2	Orthogroups_2024-Update
Sobic.002G047600.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.14	Orthogroups_2024-Update
Sobic.002G304900.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.25	Orthogroups_2024-Update
Solyc04g008460	No alias	SET-domain containing protein lysine methyltransferase...	0.19	Orthogroups_2024-Update
Solyc06g060400	No alias	Ribosomal protein L15 (AHRD V3.3 *** K4C6M0_SOLLC)	0.21	Orthogroups_2024-Update
Solyc06g064630	No alias	Ribosomal protein L15 (AHRD V3.3 *** K4C793_SOLLC)	0.11	Orthogroups_2024-Update
Sopen04g003610	No alias	Ribosomal L15	0.13	Orthogroups_2024-Update
Sopen06g020540	No alias	Ribosomal L15	0.13	Orthogroups_2024-Update
Sopen06g023110	No alias	Ribosomal L15	0.26	Orthogroups_2024-Update
evm.model.contig_2025.57	No alias	(at4g16720 : 267.0) Ribosomal protein L23/L15e family...	0.22	Orthogroups_2024-Update
evm.model.tig00000310.75	No alias	(at4g16720 : 256.0) Ribosomal protein L23/L15e family...	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	IEP	Predicted GO
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005741	mitochondrial outer membrane	IEP	Predicted GO
CC	GO:0005759	mitochondrial matrix	IEP	Predicted GO
BP	GO:0006188	IMP biosynthetic process	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016597	amino acid binding	IEP	Predicted GO
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predicted GO
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0016842	amidine-lyase activity	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0031406	carboxylic acid binding	IEP	Predicted GO
CC	GO:0031968	organelle outer membrane	IEP	Predicted GO
BP	GO:0032392	DNA geometric change	IEP	Predicted GO
BP	GO:0032508	DNA duplex unwinding	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0043138	3'-5' DNA helicase activity	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
MF	GO:0043177	organic acid binding	IEP	Predicted GO
CC	GO:0044429	mitochondrial part	IEP	Predicted GO
BP	GO:0046040	IMP metabolic process	IEP	Predicted GO
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000439	Ribosomal_L15e	2	190

External Links

No external refs found!

Brara.C04524.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation