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  5. Brara.C04568.1

Brara.C04568.1


Description : group-I RNA polymerase-II phosphatase & subcluster CPL phosphatase & phosphatase component *(CPL) of chromatin silencing regulator complex


Gene families : OG_42_0002313 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C04568.1
Cluster HCAA Clusters: Cluster_386

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g44710 No alias double-stranded RNA binding motif containing protein, expressed 0.04 Orthogroups_2024-Update
Seita.1G248600.1 No alias group-I RNA polymerase-II phosphatase & subcluster CPL... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004274 FCP1_dom 261 373
IPR014720 dsRBD_dom 844 907
No external refs found!