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  5. Brara.C04633.1

Brara.C04633.1


Description : bicarbonate signal transducer *(RHC1) & metabolite transporter *(DTX)


Gene families : OG_42_0006413 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C04633.1
Cluster HCAA Clusters: Cluster_324

Target Alias Description ECC score Gene Family Method Actions
Bradi1g00780 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Potri.001G115400 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0042910 xenobiotic transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 53 212
IPR002528 MATE_fam 275 437
No external refs found!